STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2249Putative DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family. (230 aa)    
Predicted Functional Partners:
potG
Putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
    0.788
BAV2250
Putative arsenate reductase; Belongs to the ArsC family.
       0.782
potI
Putrescine ABC transporter, permease protein.
       0.782
potH
Putrescine ABC transporter, permease protein.
       0.782
potF
Putrescine ABC transporter, substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
       0.782
BAV3335
Putative membrane protein.
  
     0.579
BAV2217
Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.).
  
  
 0.548
ada
Ada regulatory protein (methylated-dna--protein-cysteine methyltransferase); Similar over its C-terminal region to BAV2217 (45.399 38d.).
  
  
 0.548
BAV2665
Putative lipoprotein.
  
     0.543
BAV2257
Putative membrane protein.
       0.492
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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