STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potHPutrescine ABC transporter, permease protein. (300 aa)    
Predicted Functional Partners:
potI
Putrescine ABC transporter, permease protein.
 
0.999
potF
Putrescine ABC transporter, substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
 0.999
potG
Putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 0.997
BAV2250
Putative arsenate reductase; Belongs to the ArsC family.
       0.874
BAV0923
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.860
BAV3356
ABC transporter, permease protein.
 
  
0.852
BAV1190
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.810
BAV3357
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.797
BAV2249
Putative DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family.
       0.782
BAV0103
Probable ABC-transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.766
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.