STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potGPutrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (375 aa)    
Predicted Functional Partners:
potI
Putrescine ABC transporter, permease protein.
 
 0.997
potH
Putrescine ABC transporter, permease protein.
 
 0.997
potF
Putrescine ABC transporter, substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.996
BAV2250
Putative arsenate reductase; Belongs to the ArsC family.
       0.854
BAV2249
Putative DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family.
  
    0.786
BAV3356
ABC transporter, permease protein.
 
 
 0.755
BAV2255
Putative 3-deoxy-D-manno-octulosonic acid kinase; Start codon not provided.
       0.669
BAV2257
Putative membrane protein.
       0.572
BAV0924
ABC transporter, permease.
 
 
 0.560
BAV2256
Hemoglobin-like protein.
   
   0.549
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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