STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2279Conserved hypothetical protein. (151 aa)    
Predicted Functional Partners:
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
 
 0.839
BAV2278
Putative membrane-associated ribonuclease; Similar to over its N-terminal region to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 tRNA processing ribonuclease bn Rbn SWALL:RBN_ECOLI (SWALL:P32146) (290 aa) fasta scores: E(): 1.5e-34, 38.6 38d in 272 aa.
   
   0.744
purL
Phosphoribosylformylglycinamidine synthase; Start codon not provided; In the N-terminal section; belongs to the FGAMS family.
  
  
 0.723
BAV0485
Putative branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
    0.649
BAV1082
Putative branched-chain amino acid ABC transporter ATP-binding/permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
    0.649
BAV1272
ABC tranpsorter, ATP binding/permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
    0.649
BAV1825
Conserved hypothetical protein.
  
 0.643
ribB
Putative 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
  
 0.626
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
   
 0.611
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
  
 0.572
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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