STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2286Putative pilus assembly protein; Belongs to the bacterial secretin family. (426 aa)    
Predicted Functional Partners:
BAV2285
Putative pilus assembly protein.
 
 0.998
BAV2287
Putative pilus assembly protein.
 
 
 0.997
BAV2283
Putative pilus assembly protein.
 
 
 0.994
BAV2284
Putative pilus assembly protein.
 
 
 0.994
BAV2531
Putative type IV pilus assembly protein (pseudogene); Unassigned protein domain.
 
 
 0.976
BAV2528
Putative type IV pilus assembly protein.
 
 
 0.966
BAV2527
Partial CDS. Similar to the Bordetellae putative lipoprotein BB1831/BPP2381/BP2001.
 
 0.958
BAV2290
Putative pilus assembly protein; No significant database matches.
 
  
 0.922
BAV2291
Putative type IV pilin.
 
     0.891
BAV2288
Putative pilus assembly protein.
       0.773
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.