STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2291Putative type IV pilin. (90 aa)    
Predicted Functional Partners:
BAV2290
Putative pilus assembly protein; No significant database matches.
 
     0.969
BAV2287
Putative pilus assembly protein.
 
     0.956
BAV2284
Putative pilus assembly protein.
 
     0.920
BAV2285
Putative pilus assembly protein.
 
     0.920
BAV2358
Putative type IV pilin subunit.
     
  0.900
BAV2283
Putative pilus assembly protein.
 
     0.895
BAV2286
Putative pilus assembly protein; Belongs to the bacterial secretin family.
 
     0.892
BAV2288
Putative pilus assembly protein.
       0.773
BAV2289
Putative pilus assembly protein; No significant database matches.
       0.773
BAV0861
Putative ribonuclease inhibitor.
  
     0.656
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.