STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2354Putative exported protein. (203 aa)    
Predicted Functional Partners:
BAV2353
Hypothetical protein; No significant database matches.
       0.506
bhuR
Outer membrane TonB-dependent heme receptor.
  
     0.497
pqiA
Paraquat-inducible protein A.
  
     0.484
BAV3379
Putative membrane protein.
  
     0.477
BAV1804
Putative lipoprotein; No significant database matches.
  
     0.466
BAV0388
Hypothetical protein.
  
     0.428
BAV0827
Putative exported protein.
  
    0.416
BAV2464
Putative lipoprotein.
  
     0.403
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.