STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2359Type IV pilus assembly protein. (366 aa)    
Predicted Functional Partners:
BAV2360
Type IV pilus assembly protein.
  
 
 0.940
BAV2358
Putative type IV pilin subunit.
  
  
 0.902
BAV2357
Putative type IV pilus-associated protein; Start codon not provided.
  
  
 0.899
BAV2363
Type IV pilus assembly protein.
  
  
 0.852
BAV2362
Putative type IV pilus assembly protein; No significant database matches. Seems to be unique to the Bordetellae.
  
    0.837
BAV2364
Type IV pilus assembly protein.
       0.812
BAV2361
Putative type IV pilus assembly protein; No significant database matches. Seems to be unique to the Bordetellae.
       0.773
gspE
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.748
BAV1541
Putative competence protein.
  
  
 0.744
gspI
General secretion pathway protein I.
  
  
 0.619
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.