STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2363Type IV pilus assembly protein. (520 aa)    
Predicted Functional Partners:
BAV2362
Putative type IV pilus assembly protein; No significant database matches. Seems to be unique to the Bordetellae.
       0.869
BAV2359
Type IV pilus assembly protein.
  
  
 0.852
gspC
General secretion pathway protein C.
  
 
 0.825
BAV2360
Type IV pilus assembly protein.
  
  
 0.809
BAV2357
Putative type IV pilus-associated protein; Start codon not provided.
  
  
 0.803
BAV2358
Putative type IV pilin subunit.
  
  
 0.794
BAV2364
Type IV pilus assembly protein.
       0.789
BAV2361
Putative type IV pilus assembly protein; No significant database matches. Seems to be unique to the Bordetellae.
       0.782
dltD
Putative D-alanine transferase.
  
     0.772
BAV2171
Conserved hypothetical protein; Start codon not provided.
  
     0.771
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.