STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maaIMaleylacetoacetate isomerase (glutathione-S-transferase). (214 aa)    
Predicted Functional Partners:
phnG
1-hydroxy-2-naphthoate dioxygenase; Start codon not provided.
 
  
 0.941
nagI
Gentisate 1,2-dioxygenase.
 
  
 0.938
BAV1915
Probable dioxygenase.
 
  
 0.933
nagK
Fumarylpyruvate hydrolase.
  
 
 0.914
BAV2295
Putative hydrolase.
  
 
 0.914
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
 
 
 0.906
nagL
Maleylpyruvate isomerase (glutathione S-transferase).
  
  
 
0.904
fahA
Fumarylacetoacetase.
 
 0.861
bllY
4-hydroxyphenylpyruvate dioxygenase (putative hemolysin).
 
  
 0.828
rpoA
DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.742
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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