STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2409Putative membrane protein; Start codon not provided. (576 aa)    
Predicted Functional Partners:
norM
Multidrug resistance protein.
 
    0.910
BAV2282
Putative membrane protein.
  
     0.755
BAV1041
Outer membrane porin protein.
  
     0.744
BAV1186
Conserved hypothetical protein.
  
     0.742
bph3
DNA-binding protein (histone).
  
     0.728
BAV2759
Putative thioredoxin.
  
     0.717
BAV3103
Outer membrane porin.
  
     0.716
BAV0229
Putative exported protein.
  
     0.710
BAV0357
Outer membrane porin protein; Start codon not provided.
  
     0.709
fliT
Flagellar protein.
  
     0.709
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.