STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2442Putative signaling protein. (692 aa)    
Predicted Functional Partners:
BAV2324
Putative metal-dependent phosphohydrolase.
  
 0.722
bvgS
Virulence sensor protein; Start codon not provided.
 
 0.705
BAV1789
Putative signaling protein; Its C-terminal region is similar to the C-terminal region of Pseudomonas putida regulator MorA.
 
 
0.684
wlbJK
Putative membrane protein.
  
 
 0.671
BAV1934
Putative signaling protein.
 
 
0.609
BAV1003
Putative signaling protein.
 
0.597
BAV1874
Putative response regulator.
 
  
0.563
BAV2443
Putative membrane protein.
       0.533
nadX
LysR-family transcriptional regulator (pseudogene); Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
       0.480
BAV1188
Putative signaling protein.
 
0.478
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
Server load: low (22%) [HD]