STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2442Putative signaling protein. (692 aa)    
Predicted Functional Partners:
BAV2324
Putative metal-dependent phosphohydrolase.
 
  
 0.735
wlbJK
Putative membrane protein.
  
 
 0.686
bvgS
Virulence sensor protein; Start codon not provided.
 
 
 0.646
BAV1934
Putative signaling protein.
 
 
0.640
BAV1789
Putative signaling protein; Its C-terminal region is similar to the C-terminal region of Pseudomonas putida regulator MorA.
 
 
0.622
BAV1003
Putative signaling protein.
 
0.615
BAV1874
Putative response regulator.
 
  
0.558
BAV2443
Putative membrane protein.
       0.533
BAV2275
Two-component sensor kinase.
  
 
 0.492
BAV1188
Putative signaling protein.
 
 
0.482
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.