STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ohrOrganic hydroperoxide resistance protein. (141 aa)    
Predicted Functional Partners:
ohrR
MarR-family transcriptional regulator.
  
 0.954
katB
Catalase; Start codon not provided; Belongs to the catalase family.
  
  
 0.540
BAV0912
Conserved hypothetical protein.
   
    0.539
BAV0779
Putative bacterioferritin; Belongs to the Dps family.
  
  
 0.538
dps
Ferritin-like DNA-binding protein; Belongs to the Dps family.
  
  
 0.538
hndJ
ABC transporter, permease protein.
       0.482
hndI
ABC transporter, ATP-binding protein; Start codon not provided.
     
 0.482
BAV1231
Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.473
BAV2051
Conserved hypothetical protein.
  
  
 0.473
hmp
Flavohemoprotein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
     
 0.453
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.