STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ohrOrganic hydroperoxide resistance protein. (141 aa)    
Predicted Functional Partners:
ohrR
MarR-family transcriptional regulator.
  
 0.962
BAV0779
Putative bacterioferritin; Belongs to the Dps family.
  
  
 0.608
dps
Ferritin-like DNA-binding protein; Belongs to the Dps family.
  
  
 0.608
katB
Catalase; Start codon not provided; Belongs to the catalase family.
  
  
 0.574
BAV2955
Putative serine protein kinase; Start codon not provided.
   
    0.521
hndI
ABC transporter, ATP-binding protein; Start codon not provided.
     
 0.496
hndJ
ABC transporter, permease protein.
       0.480
BAV1832
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
  
 0.469
BAV1231
Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.442
BAV2051
Conserved hypothetical protein.
  
  
 0.442
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.