STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2460Multidrug efflux system outer membrane protein. (508 aa)    
Predicted Functional Partners:
BAV2461
Multidrug efflux system transmembrane protein.
 0.989
BAV2462
Multidrug efflux system inner membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.983
acrB
Acriflavine resistance protein B (multidrug efflux system transmembrane protein).
 0.968
acrA
Acriflavine resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.962
BAV1812
Outer membrane efflux protein.
  
  
 
0.909
BAV1655
Multidrug efflux system outer membrane protein.
  
  
 
0.905
BAV1940
Putative HlyD-family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.847
BAV2933
Multidrug efflux system inner membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.847
BAV2932
Multidrug efflux system transmembrane protein; Start codon not provided; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.846
pdxJ
Pyridoxal phosphate biosynthetic protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
       0.811
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.