STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2463Putative transcriptional regulator (partial CDS); Partial CDS. Similar to the C-terminal region of many regulators including Rhodobacter sphaeroides DmsR and Escherichia coli aerobic respiration control protein ArcA. (127 aa)    
Predicted Functional Partners:
wlbJK
Putative membrane protein.
  
 
 0.984
bvgS
Virulence sensor protein; Start codon not provided.
  
 
 0.981
BAV1662
Two-component sensor kinase.
  
 
 0.746
BAV0353
Methyl-accepting-chemotaxis-protein.
  
 
 0.745
BAV0789
Chemotaxis sensory transducer.
  
 
 0.745
BAV1703
Methyl-accepting chemotaxis protein; Start codon not provided.
  
 
 0.745
BAV1003
Putative signaling protein.
  
 
 0.677
BAV2274
Putative signaling protein; Start codon not provided; Similar to the C_terminal region of many CDSs including Pseudomonas aeruginosa hypothetical signaling protein pa1727 SWALL:YH27_PSEAE (SWALL:Q9I310) (685 aa) fasta scores: E(): 5e-46, 35.98 38d in 453 aa.
  
 
 0.660
BAV1789
Putative signaling protein; Its C-terminal region is similar to the C-terminal region of Pseudomonas putida regulator MorA.
  
  
 0.626
BAV2275
Two-component sensor kinase.
 
  
 0.583
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.