STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbbbCProbable molybdopterin-containing oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (753 aa)    
Predicted Functional Partners:
fdnH
Nformate dehydrogenase, iron-sulfur subunit.
  
 
 0.880
citB
Citrate utilization protein B.
  
 
 0.827
fdsC
Formate dehydrogenase associated protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
  
 0.826
gltB
Glutamate synthase [NADPH] large chain precursor.
  
 
 0.756
fdnI
Formate dehydrogenase, cytochrome b556.
  
 
 0.665
petA
Ubiquinol-cytochrome C reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.627
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.624
tuf-2
Elongation factor Tu.
   
 
 0.624
BAV1534
Putative bifunctional protein,oxidoreductase/cytochrome subunits.
  
 
 0.605
BAV3247
Putative cytochrome C subunit of gluconate dehydrogenase.
 
 
 0.603
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.