STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAV2528Putative type IV pilus assembly protein. (305 aa)    
Predicted Functional Partners:
BAV2283
Putative pilus assembly protein.
 
 
 0.996
BAV2531
Putative type IV pilus assembly protein (pseudogene); Unassigned protein domain.
 
 
 0.995
BAV2285
Putative pilus assembly protein.
 
 
 0.993
BAV2527
Partial CDS. Similar to the Bordetellae putative lipoprotein BB1831/BPP2381/BP2001.
 
 
 0.992
BAV2287
Putative pilus assembly protein.
 
 
 0.986
BAV2286
Putative pilus assembly protein; Belongs to the bacterial secretin family.
 
 
 0.966
BAV2284
Putative pilus assembly protein.
  
  
 
0.928
BAV2532
Putative type IV pilus assembly protein (partial); Belongs to the bacterial secretin family.
 
  
 0.866
BAV2534
Putative pilin subunit.
 
  
 0.803
BAV1789
Putative signaling protein; Its C-terminal region is similar to the C-terminal region of Pseudomonas putida regulator MorA.
  
    0.713
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.