STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2531Putative type IV pilus assembly protein (pseudogene); Unassigned protein domain. (443 aa)    
Predicted Functional Partners:
BAV2532
Putative type IV pilus assembly protein (partial); Belongs to the bacterial secretin family.
 
  
 0.981
BAV2528
Putative type IV pilus assembly protein.
 
  
 0.954
BAV2534
Putative pilin subunit.
 
  
 0.940
BAV2533
Type 4 prepilin leader peptidase.
  
  
 0.926
BAV2287
Putative pilus assembly protein.
 
  
 0.923
BAV2284
Putative pilus assembly protein.
 
  
 0.922
BAV2283
Putative pilus assembly protein.
 
  
 0.898
BAV2527
Partial CDS. Similar to the Bordetellae putative lipoprotein BB1831/BPP2381/BP2001.
 
  
 0.851
BAV2285
Putative pilus assembly protein.
 
  
 0.833
BAV2536
Putative exported protein (partial); Partial CDS. truncated at N-terminus.
  
     0.758
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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