STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2532Putative type IV pilus assembly protein (partial); Belongs to the bacterial secretin family. (117 aa)    
Predicted Functional Partners:
BAV2531
Putative type IV pilus assembly protein (pseudogene); Unassigned protein domain.
 
  
 0.981
BAV2533
Type 4 prepilin leader peptidase.
  
  
 0.944
BAV2285
Putative pilus assembly protein.
 
  
 0.884
BAV2534
Putative pilin subunit.
 
  
 0.871
BAV2528
Putative type IV pilus assembly protein.
 
  
 0.866
BAV2287
Putative pilus assembly protein.
 
  
 0.830
BAV2283
Putative pilus assembly protein.
 
  
 0.829
BAV2284
Putative pilus assembly protein.
 
  
 0.814
BAV2286
Putative pilus assembly protein; Belongs to the bacterial secretin family.
  
     0.768
BAV2527
Partial CDS. Similar to the Bordetellae putative lipoprotein BB1831/BPP2381/BP2001.
 
 
 0.737
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.