STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2533Type 4 prepilin leader peptidase. (168 aa)    
Predicted Functional Partners:
BAV2532
Putative type IV pilus assembly protein (partial); Belongs to the bacterial secretin family.
  
  
 0.941
BAV2531
Putative type IV pilus assembly protein (pseudogene); Unassigned protein domain.
  
  
 0.926
BAV2534
Putative pilin subunit.
  
  
 0.875
BAV2287
Putative pilus assembly protein.
  
  
 0.766
BAV2528
Putative type IV pilus assembly protein.
  
  
 0.709
BAV2535
Putative signaling protein.
  
    0.639
BAV2525
Probable sigma-54 interacting transcription regulator (partial); Partial CDS. Similar to an internal region of the Bordetellae putative response regulators BB1834/BPP2384/BP2004.
  
    0.590
BAV2284
Putative pilus assembly protein.
  
  
 0.540
BAV2285
Putative pilus assembly protein.
     
 0.479
BAV3017
Conserved hypothetical protein.
   
    0.408
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.