npdA protein (Bordetella avium) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

npdA

NAD-dependent deacetylase (Sir2-like regulatory protein); NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. (272 aa)

Predicted Functional Partners:

BAV3390

0.749

srpH

0.748

recQ

0.617

BAV1363

0.599

aphA1

0.599

aphA2

0.599

icd-2

0.597

BAV0583

0.594

BAV1835

0.591

nadE

0.582

Your Current Organism:

Bordetella avium

NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAV0583	npdA	BAV0583	BAV2551	Putative permease (pseudogene); Unassigned protein domain.	NAD-dependent deacetylase (Sir2-like regulatory protein); NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.	0.594
BAV1363	BAV1835	BAV1363	BAV1835	Histone deacetylase family protein.	Putative lipoprotein.	0.637
BAV1363	BAV3390	BAV1363	BAV3390	Histone deacetylase family protein.	Conserved hypothetical protein.	0.685
BAV1363	npdA	BAV1363	BAV2551	Histone deacetylase family protein.	NAD-dependent deacetylase (Sir2-like regulatory protein); NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.	0.599
BAV1835	BAV1363	BAV1835	BAV1363	Putative lipoprotein.	Histone deacetylase family protein.	0.637
BAV1835	BAV3390	BAV1835	BAV3390	Putative lipoprotein.	Conserved hypothetical protein.	0.543
BAV1835	aphA1	BAV1835	BAV2201	Putative lipoprotein.	Acetylpolyamine aminohydrolase; Also similar to BAV2226 (42.857 38d.).	0.637
BAV1835	aphA2	BAV1835	BAV2226	Putative lipoprotein.	Acetylpolyamine aminohydrolase; Also similar to BAV2201 (42.857 38d.).	0.637
BAV1835	npdA	BAV1835	BAV2551	Putative lipoprotein.	NAD-dependent deacetylase (Sir2-like regulatory protein); NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.	0.591
BAV3390	BAV1363	BAV3390	BAV1363	Conserved hypothetical protein.	Histone deacetylase family protein.	0.685
BAV3390	BAV1835	BAV3390	BAV1835	Conserved hypothetical protein.	Putative lipoprotein.	0.543
BAV3390	aphA1	BAV3390	BAV2201	Conserved hypothetical protein.	Acetylpolyamine aminohydrolase; Also similar to BAV2226 (42.857 38d.).	0.622
BAV3390	aphA2	BAV3390	BAV2226	Conserved hypothetical protein.	Acetylpolyamine aminohydrolase; Also similar to BAV2201 (42.857 38d.).	0.622
BAV3390	npdA	BAV3390	BAV2551	Conserved hypothetical protein.	NAD-dependent deacetylase (Sir2-like regulatory protein); NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.	0.749
aphA1	BAV1835	BAV2201	BAV1835	Acetylpolyamine aminohydrolase; Also similar to BAV2226 (42.857 38d.).	Putative lipoprotein.	0.637
aphA1	BAV3390	BAV2201	BAV3390	Acetylpolyamine aminohydrolase; Also similar to BAV2226 (42.857 38d.).	Conserved hypothetical protein.	0.622
aphA1	npdA	BAV2201	BAV2551	Acetylpolyamine aminohydrolase; Also similar to BAV2226 (42.857 38d.).	NAD-dependent deacetylase (Sir2-like regulatory protein); NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.	0.599
aphA2	BAV1835	BAV2226	BAV1835	Acetylpolyamine aminohydrolase; Also similar to BAV2201 (42.857 38d.).	Putative lipoprotein.	0.637
aphA2	BAV3390	BAV2226	BAV3390	Acetylpolyamine aminohydrolase; Also similar to BAV2201 (42.857 38d.).	Conserved hypothetical protein.	0.622
aphA2	npdA	BAV2226	BAV2551	Acetylpolyamine aminohydrolase; Also similar to BAV2201 (42.857 38d.).	NAD-dependent deacetylase (Sir2-like regulatory protein); NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.	0.599

page 1 of 2

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About