BAV2580 protein (Bordetella avium) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

BAV2580

Putative ABC transporter, substrate binding protein. (333 aa)

Predicted Functional Partners:

BAV2581

0.968

BAV2582

0.952

BAV2585

0.854

BAV1989

0.834

BAV2584

0.815

BAV3383

0.787

BAV2583

0.778

BAV0740

0.772

BAV0987

0.768

BAV1910

0.761

Your Current Organism:

Bordetella avium

NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
BAV0740	BAV1989	ABC transporter, permease protein.	ABC transporter, permease protein.	0.808
BAV0740	BAV2580	ABC transporter, permease protein.	Putative ABC transporter, substrate binding protein.	0.772
BAV0740	BAV2581	ABC transporter, permease protein.	ABC transporter, permease protein.	0.420
BAV0740	BAV2582	ABC transporter, permease protein.	ABC transporter, ATP-binding protein.	0.593
BAV0987	BAV2580	Conserved hypothetical protein.	Putative ABC transporter, substrate binding protein.	0.768
BAV1910	BAV2580	ABC transporter, permease protein.	Putative ABC transporter, substrate binding protein.	0.761
BAV1910	BAV2582	ABC transporter, permease protein.	ABC transporter, ATP-binding protein.	0.582
BAV1989	BAV0740	ABC transporter, permease protein.	ABC transporter, permease protein.	0.808
BAV1989	BAV2580	ABC transporter, permease protein.	Putative ABC transporter, substrate binding protein.	0.834
BAV1989	BAV2582	ABC transporter, permease protein.	ABC transporter, ATP-binding protein.	0.729
BAV1989	BAV3383	ABC transporter, permease protein.	ABC transporter, permease component.	0.808
BAV2580	BAV0740	Putative ABC transporter, substrate binding protein.	ABC transporter, permease protein.	0.772
BAV2580	BAV0987	Putative ABC transporter, substrate binding protein.	Conserved hypothetical protein.	0.768
BAV2580	BAV1910	Putative ABC transporter, substrate binding protein.	ABC transporter, permease protein.	0.761
BAV2580	BAV1989	Putative ABC transporter, substrate binding protein.	ABC transporter, permease protein.	0.834
BAV2580	BAV2581	Putative ABC transporter, substrate binding protein.	ABC transporter, permease protein.	0.968
BAV2580	BAV2582	Putative ABC transporter, substrate binding protein.	ABC transporter, ATP-binding protein.	0.952
BAV2580	BAV2583	Putative ABC transporter, substrate binding protein.	Hypothetical protein; No significant database matches.	0.778
BAV2580	BAV2584	Putative ABC transporter, substrate binding protein.	Putative amidase.	0.815
BAV2580	BAV2585	Putative ABC transporter, substrate binding protein.	GntR-family transcriptional regulator; Start codon not provided.	0.854