STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clsPutative cardiolipin synthetase. (486 aa)    
Predicted Functional Partners:
ybhO
Putative cardiolipin synthetase; Start codon not provided.
  
  
 
0.926
pgpA
Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
     
 0.912
plcN1
Non-hemolytic phospholipase C; Also similar to BAV1803 (49.7 38d.).
     
 0.906
plcN2
Non-hemolytic phospholipase C; Start codon not provided; Also similar to BAV1084 (49.7 38d.).
     
 0.906
wlbJK
Putative membrane protein.
   
 
 0.529
BAV1825
Conserved hypothetical protein.
   
 0.506
BAV1541
Putative competence protein.
   
 
 0.463
BAV2255
Putative 3-deoxy-D-manno-octulosonic acid kinase; Start codon not provided.
  
 
 0.423
bvgS
Virulence sensor protein; Start codon not provided.
   
 
 0.421
plsY
Putative membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
     
 0.415
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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