BAV2612 protein (Bordetella avium) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Experiments

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[Homology]

Score

BAV2612

ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (551 aa)

Predicted Functional Partners:

BAV2613

0.905

BAV2614

0.859

BAV2197

0.698

BAV2615

0.666

BAV2611

0.664

BAV1078

0.628

BAV1848

0.565

BAV1562

0.563

BAV1646

0.563

BAV2610

0.543

Your Current Organism:

Bordetella avium

NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
BAV1078	BAV2612	Putative cobalt ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.628
BAV1562	BAV2610	ABC transporter, permease protein.	ABC transporter, substrate-binding protein.	0.591
BAV1562	BAV2612	ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.563
BAV1562	BAV2614	ABC transporter, permease protein.	ABC transporter, permease protein.	0.812
BAV1646	BAV2610	ABC transporter, permease protein.	ABC transporter, substrate-binding protein.	0.691
BAV1646	BAV2612	ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.563
BAV1646	BAV2614	ABC transporter, permease protein.	ABC transporter, permease protein.	0.833
BAV1848	BAV2610	ABC transporter, permease protein.	ABC transporter, substrate-binding protein.	0.493
BAV1848	BAV2612	ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.565
BAV1848	BAV2614	ABC transporter, permease protein.	ABC transporter, permease protein.	0.825
BAV2197	BAV2610	ABC transporter permease protein.	ABC transporter, substrate-binding protein.	0.673
BAV2197	BAV2612	ABC transporter permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.698
BAV2197	BAV2614	ABC transporter permease protein.	ABC transporter, permease protein.	0.830
BAV2610	BAV1562	ABC transporter, substrate-binding protein.	ABC transporter, permease protein.	0.591
BAV2610	BAV1646	ABC transporter, substrate-binding protein.	ABC transporter, permease protein.	0.691
BAV2610	BAV1848	ABC transporter, substrate-binding protein.	ABC transporter, permease protein.	0.493
BAV2610	BAV2197	ABC transporter, substrate-binding protein.	ABC transporter permease protein.	0.673
BAV2610	BAV2611	ABC transporter, substrate-binding protein.	GntR-family transcriptional regulator.	0.597
BAV2610	BAV2612	ABC transporter, substrate-binding protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.543
BAV2610	BAV2613	ABC transporter, substrate-binding protein.	ABC transporter, permease protein.	0.884