STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
xanBCapsular polysaccharide biosynthesis protein [includes: mannose-6-phosphate isomerase and mannose-1-phosphate guanylyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family. (472 aa)    
Predicted Functional Partners:
BAV2636
Capsular polysaccharide biosynthesis glucosyltransferase.
  
  
 0.995
pgm
Phosphoglucomutase; Start codon not provided.
 
 0.979
pgi
Glucose-6-phosphate isomerase.
  
 
 0.957
rkpK
UDP-glucose 6-dehydrogenase.
 
 
 0.954
rfbA
Glucose-1-phosphate thymidylyltransferase 1; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.941
glmS
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.934
fbp
Fructose-1,6-bisphosphatase.
   
 0.926
gtaB
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.920
BAV1396
PTS system IIa component.
    
 0.919
rfbF
Glucose-1-phosphate cytidylyltransferase.
  
 
 0.910
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.