STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xanBCapsular polysaccharide biosynthesis protein [includes: mannose-6-phosphate isomerase and mannose-1-phosphate guanylyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family. (472 aa)    
Predicted Functional Partners:
BAV2636
Capsular polysaccharide biosynthesis glucosyltransferase.
  
  
 0.998
pgm
Phosphoglucomutase; Start codon not provided.
 
 0.979
pgi
Glucose-6-phosphate isomerase.
  
 
 0.956
fbp
Fructose-1,6-bisphosphatase.
   
 0.932
glmS
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.921
BAV1396
PTS system IIa component.
    
 0.920
BAV0087
Putative lipopolysaccharide biosynthesis protein.
 
  
  0.913
wlbL
Putative sugar epimerase/dehydratase.
  
  
 0.856
wlbG
Probable sugar transferase; Start codon not provided.
  
  
 0.849
BAV3078
Putative exopolysaccharide biosynthesis glycosyl transferase.
  
  
 0.849
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.