Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAV0122 | BAV2636 | BAV0122 | BAV2636 | Putative O-antigen polymerase. | Capsular polysaccharide biosynthesis glucosyltransferase. | 0.900 |
BAV0122 | BAV2639 | BAV0122 | BAV2639 | Putative O-antigen polymerase. | Putative capsular polysaccharide export protein; Start codon not provided. | 0.442 |
BAV0122 | xanB | BAV0122 | BAV2635 | Putative O-antigen polymerase. | Capsular polysaccharide biosynthesis protein [includes: mannose-6-phosphate isomerase and mannose-1-phosphate guanylyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.653 |
BAV0494 | BAV2636 | BAV0494 | BAV2636 | Hypothetical protein; No significant database matches. | Capsular polysaccharide biosynthesis glucosyltransferase. | 0.878 |
BAV0494 | BAV2639 | BAV0494 | BAV2639 | Hypothetical protein; No significant database matches. | Putative capsular polysaccharide export protein; Start codon not provided. | 0.532 |
BAV0494 | xanB | BAV0494 | BAV2635 | Hypothetical protein; No significant database matches. | Capsular polysaccharide biosynthesis protein [includes: mannose-6-phosphate isomerase and mannose-1-phosphate guanylyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.792 |
BAV2636 | BAV0122 | BAV2636 | BAV0122 | Capsular polysaccharide biosynthesis glucosyltransferase. | Putative O-antigen polymerase. | 0.900 |
BAV2636 | BAV0494 | BAV2636 | BAV0494 | Capsular polysaccharide biosynthesis glucosyltransferase. | Hypothetical protein; No significant database matches. | 0.878 |
BAV2636 | BAV2639 | BAV2636 | BAV2639 | Capsular polysaccharide biosynthesis glucosyltransferase. | Putative capsular polysaccharide export protein; Start codon not provided. | 0.987 |
BAV2636 | BAV2649 | BAV2636 | BAV2649 | Capsular polysaccharide biosynthesis glucosyltransferase. | Putative capsular polysaccharide biosynthesis protein; Start codon not provided. | 0.915 |
BAV2636 | BAV2650 | BAV2636 | BAV2650 | Capsular polysaccharide biosynthesis glucosyltransferase. | Putative capsular polysaccharide biosynthesis protein. | 0.950 |
BAV2636 | BAV2651 | BAV2636 | BAV2651 | Capsular polysaccharide biosynthesis glucosyltransferase. | Start codon not provided; Similar to N-terminus of many polysaccharide biosynthesis proteins. | 0.925 |
BAV2636 | BAV3077 | BAV2636 | BAV3077 | Capsular polysaccharide biosynthesis glucosyltransferase. | Putative exopolysaccharide biosynthesis aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.926 |
BAV2636 | wlbC | BAV2636 | BAV0096 | Capsular polysaccharide biosynthesis glucosyltransferase. | Lipopolysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.926 |
BAV2636 | wlbF | BAV2636 | BAV0094 | Capsular polysaccharide biosynthesis glucosyltransferase. | Lipopolysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.926 |
BAV2636 | xanB | BAV2636 | BAV2635 | Capsular polysaccharide biosynthesis glucosyltransferase. | Capsular polysaccharide biosynthesis protein [includes: mannose-6-phosphate isomerase and mannose-1-phosphate guanylyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.998 |
BAV2639 | BAV0122 | BAV2639 | BAV0122 | Putative capsular polysaccharide export protein; Start codon not provided. | Putative O-antigen polymerase. | 0.442 |
BAV2639 | BAV0494 | BAV2639 | BAV0494 | Putative capsular polysaccharide export protein; Start codon not provided. | Hypothetical protein; No significant database matches. | 0.532 |
BAV2639 | BAV2636 | BAV2639 | BAV2636 | Putative capsular polysaccharide export protein; Start codon not provided. | Capsular polysaccharide biosynthesis glucosyltransferase. | 0.987 |
BAV2639 | BAV2649 | BAV2639 | BAV2649 | Putative capsular polysaccharide export protein; Start codon not provided. | Putative capsular polysaccharide biosynthesis protein; Start codon not provided. | 0.573 |
page 1 of 3