STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2636Capsular polysaccharide biosynthesis glucosyltransferase. (471 aa)    
Predicted Functional Partners:
xanB
Capsular polysaccharide biosynthesis protein [includes: mannose-6-phosphate isomerase and mannose-1-phosphate guanylyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.995
BAV2639
Putative capsular polysaccharide export protein; Start codon not provided.
 
  
 0.966
BAV2650
Putative capsular polysaccharide biosynthesis protein.
 
  
 0.953
BAV2651
Start codon not provided; Similar to N-terminus of many polysaccharide biosynthesis proteins.
 
  
 0.917
wlbF
Lipopolysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.914
wlbC
Lipopolysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.914
BAV3077
Putative exopolysaccharide biosynthesis aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.914
BAV0084
Putative lipopolysaccharide biosynthesis protein.
 
  
 0.862
BAV0494
Hypothetical protein; No significant database matches.
  
  
 0.856
mrp
Putative amidase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.841
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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