STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAV2638Putative capsular polysaccharide biosynthesis glucosyltransferase; Belongs to the glycosyltransferase 26 family. (271 aa)    
Predicted Functional Partners:
BAV2637
Putative capsular polysaccharide biosynthesis protein; Start codon not provided; Weakly similar to the C-terminal region of enterics sucrose operon repressor ScrR SWALL:SCRR_SALTY (SWALL:P37077) (334 aa) fasta scores: E(): 3.1, 30.5 38d in 177 aa.
       0.810
BAV2646
Putative capsular polysaccharide biosynthesis glycosyl transferase.
   
 0.805
BAV2639
Putative capsular polysaccharide export protein; Start codon not provided.
 
   
 0.706
wlbG
Probable sugar transferase; Start codon not provided.
   
 0.699
BAV2636
Capsular polysaccharide biosynthesis glucosyltransferase.
   
 0.679
BAV2641
Putative capsular polysaccharide biosynthesis oxidoreductase.
 
   
 0.638
BAV2642
Putative capsular polysaccharide biosynthesis protein.
 
   
 0.593
BAV3078
Putative exopolysaccharide biosynthesis glycosyl transferase.
    
 0.531
BAV2643
Putative capsular polysaccharide biosynthesis protein.
  
  
 0.481
rmlD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
  
 0.466
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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