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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2641Putative capsular polysaccharide biosynthesis oxidoreductase. (557 aa)    
Predicted Functional Partners:
BAV2642
Putative capsular polysaccharide biosynthesis protein.
 
   
 0.948
BAV2643
Putative capsular polysaccharide biosynthesis protein.
       0.773
BAV2640
Putative capsular polysaccharide biosynthesis protein.
       0.740
wssC1
Cyclic di-GMP binding protein (cellulose synthase regulatory subunit); Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
  
 
 0.693
wssI
Glutamate decarboxylase alpha/beta; Also similar to BAV2797 (80.679id 38d).
  
     0.684
BAV3249
Putative gluconate dehydrogenase subunit.
 
 
 0.644
BAV2638
Putative capsular polysaccharide biosynthesis glucosyltransferase; Belongs to the glycosyltransferase 26 family.
 
   
 0.638
BAV2639
Putative capsular polysaccharide export protein; Start codon not provided.
  
    0.607
BAV1534
Putative bifunctional protein,oxidoreductase/cytochrome subunits.
   
 
 0.584
BAV1835
Putative lipoprotein.
    
 0.560
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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