STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2644Putative capsular polysaccharide biosynthesis O-acetyl transferase; Start codon not provided. (355 aa)    
Predicted Functional Partners:
BAV2652
Putative capsular polysaccharide biosynthesis acyltransferase.
 
  
 
0.936
BAV2649
Putative capsular polysaccharide biosynthesis protein; Start codon not provided.
 
   
 0.796
BAV2651
Start codon not provided; Similar to N-terminus of many polysaccharide biosynthesis proteins.
     
 0.772
BAV2647
Putative capsular polysaccharide biosynthesis glycosyl transferase.
 
   
 0.771
BAV2645
Putative capsular polysaccharide biosynthesis protein.
  
  
 0.769
BAV2650
Putative capsular polysaccharide biosynthesis protein.
     
 0.755
BAV2646
Putative capsular polysaccharide biosynthesis glycosyl transferase.
     
 0.743
BAV2648
Putative capsular polysaccharide biosynthesis protein; No significant database matches.
       0.727
BAV2636
Capsular polysaccharide biosynthesis glucosyltransferase.
     
 0.465
wlbJK
Putative membrane protein.
  
  
 0.439
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.