STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2645Putative capsular polysaccharide biosynthesis protein. (418 aa)    
Predicted Functional Partners:
BAV2649
Putative capsular polysaccharide biosynthesis protein; Start codon not provided.
 
  
 0.921
BAV2647
Putative capsular polysaccharide biosynthesis glycosyl transferase.
 
  
 0.909
BAV2651
Start codon not provided; Similar to N-terminus of many polysaccharide biosynthesis proteins.
 
  
 0.852
BAV2650
Putative capsular polysaccharide biosynthesis protein.
  
 0.843
BAV2636
Capsular polysaccharide biosynthesis glucosyltransferase.
  
  
 0.838
BAV2646
Putative capsular polysaccharide biosynthesis glycosyl transferase.
 
  
 0.838
BAV2648
Putative capsular polysaccharide biosynthesis protein; No significant database matches.
       0.777
BAV2644
Putative capsular polysaccharide biosynthesis O-acetyl transferase; Start codon not provided.
  
  
 0.770
rfbB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.741
rkpK
UDP-glucose 6-dehydrogenase.
  
  
 0.741
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.