STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2646Putative capsular polysaccharide biosynthesis glycosyl transferase. (397 aa)    
Predicted Functional Partners:
BAV2647
Putative capsular polysaccharide biosynthesis glycosyl transferase.
 
 
 0.847
BAV2645
Putative capsular polysaccharide biosynthesis protein.
 
  
 0.838
BAV2649
Putative capsular polysaccharide biosynthesis protein; Start codon not provided.
 
   
 0.834
BAV2638
Putative capsular polysaccharide biosynthesis glucosyltransferase; Belongs to the glycosyltransferase 26 family.
   
 0.807
BAV2651
Start codon not provided; Similar to N-terminus of many polysaccharide biosynthesis proteins.
  
  
 0.799
BAV2650
Putative capsular polysaccharide biosynthesis protein.
     
 0.795
BAV2648
Putative capsular polysaccharide biosynthesis protein; No significant database matches.
       0.778
BAV2644
Putative capsular polysaccharide biosynthesis O-acetyl transferase; Start codon not provided.
     
 0.744
wssC1
Cyclic di-GMP binding protein (cellulose synthase regulatory subunit); Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
 
 
 0.666
BAV0534
Conserved hypothetical protein; Start codon not provided.
  
 
 0.624
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.