STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2652Putative capsular polysaccharide biosynthesis acyltransferase. (379 aa)    
Predicted Functional Partners:
BAV2653
Putative capsular polysaccharide biosynthesis protein; No significant database matches.
       0.773
BAV2649
Putative capsular polysaccharide biosynthesis protein; Start codon not provided.
 
   
 0.579
BAV2647
Putative capsular polysaccharide biosynthesis glycosyl transferase.
 
   
 0.502
BAV2651
Start codon not provided; Similar to N-terminus of many polysaccharide biosynthesis proteins.
     
 0.498
BAV2636
Capsular polysaccharide biosynthesis glucosyltransferase.
     
 0.496
BAV2645
Putative capsular polysaccharide biosynthesis protein.
  
  
 0.492
wlbJK
Putative membrane protein.
  
  
 0.470
BAV2650
Putative capsular polysaccharide biosynthesis protein.
     
 0.463
BAV2646
Putative capsular polysaccharide biosynthesis glycosyl transferase.
     
 0.435
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.