STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2669Putative exported protein. (172 aa)    
Predicted Functional Partners:
BAV3290
Conserved hypothetical protein.
  
     0.744
BAV2759
Putative thioredoxin.
  
     0.742
bph1
Histone.
  
     0.726
BAV2520
Outer membrane porin protein.
  
     0.712
BAV2282
Putative membrane protein.
  
    0.705
BAV2593
Putative lipoprotein.
  
 
 0.703
BAV3116
Putative exported protein.
  
     0.700
BAV1186
Conserved hypothetical protein.
  
     0.690
BAV1752
Putative membrane protein.
  
     0.688
BAV0357
Outer membrane porin protein; Start codon not provided.
  
     0.675
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.