STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2674Putative membrane protein. (735 aa)    
Predicted Functional Partners:
BAV1804
Putative lipoprotein; No significant database matches.
 
     0.689
gspN
General secretion pathway protein N.
  
     0.639
gspH
General secretion pathway protein H.
  
     0.629
gspJ
General secretion pathway protein J.
  
     0.620
BAV0388
Hypothetical protein.
  
     0.618
iscU
[Fe-S] cluster formation/repair protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.578
BAV2945
Putative transcriptional regulator; Start codon not provided.
  
     0.552
BAV2409
Putative membrane protein; Start codon not provided.
  
    0.502
risS
Two component system sensor kinase.
  
     0.486
BAV3379
Putative membrane protein.
  
     0.477
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.