STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutS-2Putative carbon monoxide dehydrogenase small subunit. (169 aa)    
Predicted Functional Partners:
cutL-2
Putative carbon monoxide dehydrogenase large subunit.
 
 0.997
cutM-2
Carbon monoxide dehydrogenase medium chain.
 
 0.995
cutL
Carbon monoxide dehydrogenase large chain.
 
 0.991
cutM
Carbon monoxide dehydrogenase medium chain; Start codon not provided.
 
 
 0.918
BAV0356
Putative molybdenum-containing aldehyde oxido-reductase; Start codon not provided.
 
 0.888
BAV3405
Putative dehydrogenase, molybdenum binding subunit; Start codon not provided.
 
 0.872
BAV2735
Putative subunit of carbon monoxide dehydrogenase.
     0.853
BAV1527
Probable aldehyde dehydrogenase.
 
 0.819
BAV3407
Conserved hypothetical protein.
 
  
 0.805
BAV1587
Conserved hypothetical protein.
 
  
 0.803
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.