STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutS-2Putative carbon monoxide dehydrogenase small subunit. (169 aa)    
Predicted Functional Partners:
cutL-2
Putative carbon monoxide dehydrogenase large subunit.
 
 0.997
cutM-2
Carbon monoxide dehydrogenase medium chain.
 
 0.995
cutL
Carbon monoxide dehydrogenase large chain.
 
 0.990
cutM
Carbon monoxide dehydrogenase medium chain; Start codon not provided.
 
 
 0.920
BAV0356
Putative molybdenum-containing aldehyde oxido-reductase; Start codon not provided.
 
 
 0.877
BAV3405
Putative dehydrogenase, molybdenum binding subunit; Start codon not provided.
 
 
 0.860
BAV2735
Putative subunit of carbon monoxide dehydrogenase.
 
   
 0.852
BAV1527
Probable aldehyde dehydrogenase.
 
 0.833
BAV3407
Conserved hypothetical protein.
 
  
 0.804
BAV1587
Conserved hypothetical protein.
 
  
 0.802
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.