STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAV2745Probable decarboxylase. (320 aa)    
Predicted Functional Partners:
BAV1584
Putative dioxygenase system, beta subunit.
  
  
 0.941
BAV1583
Putative dioxygenase system, alpha subunit.
  
  
 0.939
BAV0658
Putative oxygenase (large subunit).
  
  
 0.921
BAV0657
Putative oxygenase (small subunit).
  
  
 0.919
BAV0659
Ferredoxin.
 
 
  0.919
BAV2742
Conserved hypothetical protein.
 
     0.772
BAV2743
Probable hydrolase.
 
   
 0.772
maiA2
Maleate cis-trans isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
     0.736
BAV2741
Putative isochorismatase-family hydrolase.
 
     0.700
BAV1532
Putative salicylate hydroxylase; Start codon not provided.
 
  
 0.540
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.