STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phaPGranule-associated protein (phasin). (192 aa)    
Predicted Functional Partners:
BAV3276
Putative regulatory protein.
  
     0.768
BAV1662
Two-component sensor kinase.
  
     0.749
BAV3360
Conserved hypothetical protein.
  
     0.735
BAV1172
Putative membrane protein.
  
     0.731
BAV0357
Outer membrane porin protein; Start codon not provided.
  
     0.728
BAV2180
Putative dioxygenase.
  
     0.721
BAV3050
Conserved hypothetical protein.
  
     0.708
BAV2759
Putative thioredoxin.
  
     0.702
phbF
Putative regulator of Poly-beta-hydroxybutyrate (PHB) biosynthesis.
 
   
 0.676
BAV2520
Outer membrane porin protein.
  
     0.655
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.