STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2758Putative membrane protein. (265 aa)    
Predicted Functional Partners:
BAV2757
Conserved hypothetical protein.
       0.874
BAV2282
Putative membrane protein.
  
     0.761
BAV3116
Putative exported protein.
  
     0.753
BAV0540
Putative membrane protein; No significant database matches. Seems to be unique to the Bordetellae.
  
     0.752
BAV2759
Putative thioredoxin.
 
     0.752
BAV0861
Putative ribonuclease inhibitor.
  
     0.737
BAV0691
Putative membrane protein.
  
     0.736
BAV1041
Outer membrane porin protein.
  
     0.725
BAV2290
Putative pilus assembly protein; No significant database matches.
  
     0.712
lptE
Putative lipoprotein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.
  
     0.697
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.