STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2759Putative thioredoxin. (125 aa)    
Predicted Functional Partners:
BAV2520
Outer membrane porin protein.
  
     0.773
BAV0357
Outer membrane porin protein; Start codon not provided.
  
     0.769
BAV0603
Putative outer membrane porin.
  
     0.758
BAV2758
Putative membrane protein.
 
     0.752
BAV2669
Putative exported protein.
  
    0.744
BAV0855
Putative lytic transglycosylase.
  
 
   0.733
BAV3360
Conserved hypothetical protein.
  
     0.726
BAV2409
Putative membrane protein; Start codon not provided.
  
     0.717
BAV1186
Conserved hypothetical protein.
  
     0.715
BAV2282
Putative membrane protein.
  
 
   0.712
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.