STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgtAMagnesium transporting ATPase, P-type 1; Also similar to BAV3245 (27.7 38d). (924 aa)    
Predicted Functional Partners:
mgtC
Mg(2+) transport ATPase protein c.
 
 
 0.610
BAV0164
Conserved hypothetical protein; Start codon not provided.
   
    0.548
wlbJK
Putative membrane protein.
  
 
 0.535
sphB1
Autotransporter serine protease (pseudogene); Unassigned protein domain.
   
 
 0.498
BAV1825
Conserved hypothetical protein.
   
 0.458
BAV0350
Putative amino acid transporter.
  
 
 0.450
mntH
Manganese transport protein.
   
 0.438
BAV2769
Conserved hypothetical protein.
       0.430
BAV0166
Putative membrane protein; Start codon not provided.
   
  0.420
BAV1817
Putative membrane protein.
   
  0.420
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.