STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2786Putative cytochrome bd ubiquinol oxidase,subunit I. (444 aa)    
Predicted Functional Partners:
BAV2785
Putative cytochrome oxidase D ubiquinol oxidase,subunit II.
 
 0.999
cydB2
Cytochrome D ubiquinol oxidase subunit II; Also similar to BAV0992 (44.3 38d 0d.).
 
 
 0.939
cydB1
Cytochrome d ubiquinol oxidase subunit II; Also similar to BAV3110 (44.3 38d.).
 
 
 0.937
cydA2
Cytochrome D ubiquinol oxidase subunit I; Also similar to BAV0991 (54.6 38d.).
  
  
 
0.928
cydA1
Cytochrome D ubiquinol oxidase subunit I; Start codon not provided; Also similar to BAV3111 (54.6 38d.).
  
  
 
0.927
cydD
ABC transporter, ATP-binding protein; Start codon not provided.
 
  
 0.765
putA
Bifunctional PutA protein [includes: proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.683
cydC
ABC transporter, ATP-binding protein.
 
  
 0.647
glnS
glutaminyl-tRNA synthetase.
       0.616
BAV3109
Putative exported protein.
  
 
 0.582
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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