STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osmBOsmotically inducible lipoprotein. (73 aa)    
Predicted Functional Partners:
flgE
Flagellar hook protein.
   
 
 0.533
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.531
wlbJK
Putative membrane protein.
  
 
 0.529
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.522
ompH
Outer membrane protein; Belongs to the skp family.
  
 
 0.518
flgG
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.460
BAV2792
Putative isochorismatase hydrolase.
  
    0.456
bvgS
Virulence sensor protein; Start codon not provided.
   
 
 0.448
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
   
 
 0.440
BAV1835
Putative lipoprotein.
  
   0.433
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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