STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2805Glycosyl transferase. (312 aa)    
Predicted Functional Partners:
BAV0540
Putative membrane protein; No significant database matches. Seems to be unique to the Bordetellae.
  
     0.640
BAV2636
Capsular polysaccharide biosynthesis glucosyltransferase.
 
  
 0.616
BAV0691
Putative membrane protein.
  
     0.611
BAV2238
Lipopolysaccharide core biosynthesis glycosyl transferase; Also similar to BAV2233 (27.027 38d.).
 
  
 0.601
BAV3116
Putative exported protein.
  
  
 0.546
BAV2290
Putative pilus assembly protein; No significant database matches.
  
    0.535
BAV0861
Putative ribonuclease inhibitor.
  
     0.519
waaF
ADP-heptose--LPS heptosyltransferase II.
 
  
 0.511
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
  
   
 0.502
BAV2639
Putative capsular polysaccharide export protein; Start codon not provided.
 
  
 0.499
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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