STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2846Autotransporter; Shown to be expressed in lab of L. Temple. (935 aa)    
Predicted Functional Partners:
BAV1284
Putative phage methyltransferase.
  
     0.604
pagP
Lipid A palmitoyl transferase; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.
  
     0.594
BAV0754
Conserved hypothetical protein.
  
     0.546
BAV1777
One of 11 fimbrial subunits.
  
    0.543
aat
Acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase precursor.
  
     0.500
BAV1949
Putative two-component sensor histidine kinase.
  
     0.495
BAV3269
Autotransporter (putative serine protease).
  
  
 0.493
BAV0946
ABC transporter, substrate-binding protein.
  
     0.490
lpfC
Putative fimbrial usher; Start codon not provided.
  
    0.488
amnB
2-aminophenol 1,6-dioxygenase beta subunit.
  
     0.483
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.