STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2850Putative iron transport sensor protein. (189 aa)    
Predicted Functional Partners:
BAV0634
Ferric-siderophore receptor.
 
 
 0.848
BAV0191
Putative transferrin/hemoglobin-binding protein.
 
  
 0.753
BAV2114
Hypothetical protein; Start codon not provided; No significant database matches.
  
     0.732
hurR
Heme uptake transmembrane sensor.
  
    0.727
fecR-2
Transmembrane sensor protein.
  
    0.724
fecR
Regulator of iron dicitrate transport; Start codon not provided.
  
     0.711
hemC-2
Putative TonB-dependent heme receptor.
 
  
 0.682
BAV2972
Hypothetical protein; No significant database matches.
  
     0.680
BAV0900
Putative adhesin; Start codon not provided.
  
     0.673
BAV0856
Adhesin.
  
     0.658
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.