STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
metND-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (362 aa)    
Predicted Functional Partners:
metI
D-methionine ABC transporter, permease protein.
 
 0.999
metQ
D-methionine ABC transporter, substrate-binding protein; Also similar to BAV3166 (55.8 38d.); Belongs to the nlpA lipoprotein family.
 
 0.995
BAV1884
Putative exported protein.
 
 0.987
BAV3166
Putative exported protein; Also similar to BAV2852 (55.8 38d.).
 
 0.987
metF
5,10-methylenetetrahydrofolate reductase; Deleted EC_number 1.7.99.5; Belongs to the methylenetetrahydrofolate reductase family.
   
  
 0.742
metK
S-adenosylmethionine synthetase; Start codon not provided; Belongs to the AdoMet synthase family.
  
  
 0.677
metC
Cystathionine beta-lyase; Previously sequenced as Bordetella avium cystathionine beta-lyase metC SWALL:METC_BORAV (SWALL:Q07703) (395 aa).
  
  
 0.476
BAV2855
Putative glycoside hydrolase; Start codon not provided; Belongs to the glycosyl hydrolase 31 family.
       0.457
metH
Methionine synthase (5-methyltetrahydrofolate--homocysteine methyltransferase); Start codon not provided.
   
  
 0.428
cysG
Siroheme synthase includes: uroporphyrin-iii c-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
     
 0.415
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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