STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2932Multidrug efflux system transmembrane protein; Start codon not provided; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1021 aa)    
Predicted Functional Partners:
BAV2933
Multidrug efflux system inner membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.996
BAV2462
Multidrug efflux system inner membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.957
acrA
Acriflavine resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.952
BAV1946
Outer membrane protein.
 
 0.936
tolC
Outer membrane protein.
  
 0.922
BAV1008
Putative multidrug efflux pump; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
  
 0.920
BAV2461
Multidrug efflux system transmembrane protein.
  
  
 
0.916
acrB
Acriflavine resistance protein B (multidrug efflux system transmembrane protein).
  
  
 
0.913
dnaQ
DNA polymerase III, epsilon chain; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.
       0.768
BAV0326
HlyD-family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.734
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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