STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2943Putative two-component response regulator. (268 aa)    
Predicted Functional Partners:
wlbJK
Putative membrane protein.
  
 
 0.867
bvgS
Virulence sensor protein; Start codon not provided.
  
 
 0.830
ompB
Osmolarity two component sensor kinase.
 
 
 0.546
BAV2942
Conserved hypothetical protein.
       0.518
BAV2944
Hypothetical protein; No significant database matches.
       0.511
BAV0100
Putative bifunctional protein: two-component system sensor protein and solute-binding protein; Start codon not provided.
 
 
 0.475
BAV0524
Two-component system sensor kinase.
 
 
 0.453
BAV2945
Putative transcriptional regulator; Start codon not provided.
       0.447
risS
Two component system sensor kinase.
 
 
 0.443
BAV0016
Probable two-component sensor protein.
  
 
 0.407
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.