STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2948Conserved hypothetical protein. (231 aa)    
Predicted Functional Partners:
BAV2949
Conserved hypothetical protein.
 
     0.615
aat
Acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase precursor.
  
     0.607
BAV2615
Putative poly(aspartic acid) hydrolase.
  
     0.516
BAV1824
Putative transcriptional regulator.
  
     0.507
gspH
General secretion pathway protein H.
  
     0.445
BAV2950
Conserved hypothetical protein.
       0.445
kch
Putative potassium channel protein.
  
     0.437
BAV2610
ABC transporter, substrate-binding protein.
  
     0.435
csiD
Carbon starvation-inducible protein.
  
     0.401
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.