STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2955Putative serine protein kinase; Start codon not provided. (641 aa)    
Predicted Functional Partners:
BAV2953
Conserved hypothetical protein.
 
  
 0.997
BAV2954
Conserved hypothetical protein; Belongs to the UPF0229 family.
 
  
 0.996
BAV0850
Putative membrane protein.
   
    0.753
katB
Catalase; Start codon not provided; Belongs to the catalase family.
   
  
 0.554
BAV0754
Conserved hypothetical protein.
   
    0.537
BAV1098
Putative flavodoxin.
   
    0.536
BAV0779
Putative bacterioferritin; Belongs to the Dps family.
   
    0.511
dps
Ferritin-like DNA-binding protein; Belongs to the Dps family.
   
    0.511
ohr
Organic hydroperoxide resistance protein.
   
    0.434
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.